ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5brpC1 - ECOD Domain | ECOD

ECOD/Domains/e5brpC1

e5brpC1

UID: 001780064

PDB

Range: C:6-478
PDB: 5BRP chain C(all domains)
UniProt: Q65MI2 (all domains)
Gene: treA

Molecule: Glycoside Hydrolase Family 13

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
4-nitrophenyl alpha-D-glucopyranosidePNG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5BRP RCSB PDB: 5BRP PDBe: 5BRP UniProt: Q65MI2

Downloads

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