ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dfsB1 - ECOD Domain | ECOD

ECOD/Domains/e5dfsB1

e5dfsB1

UID: 001780197

PDB

Range: B:1-104
PDB: 5DFS chain B(all domains)
UniProt: P00003 (all domains)
Gene: CYCS

Molecule: Cytochrome c

3D Structure

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Related Domains

Browse other domains in Cytochrom_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C(107.1.1.1)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317within 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00034Cytochrom_C

Cytochrome c

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 5DFS RCSB PDB: 5DFS PDBe: 5DFS UniProt: P00003

Downloads

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