ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fmgJ1 - ECOD Domain | ECOD

ECOD/Domains/e5fmgJ1

e5fmgJ1

UID: 001780366

PDB

Range: J:15-214
PDB: 5FMG chain J(all domains)
UniProt: Q8I261 (all domains)
Gene: PF3D7_0108000

Molecule: BETA3 PROTEASOME SUBUNIT, PUTATIVE

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide7F1

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 5FMG RCSB PDB: 5FMG PDBe: 5FMG UniProt: Q8I261

Downloads

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