ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xklA1 - ECOD Domain | ECOD

ECOD/Domains/e2xklA1

e2xklA1

UID: 000178428

PDB

Range: A:24-189
PDB: 2XKL chain A(all domains)
UniProt: Q9Z1R3 (all domains)
Gene: Apom

Molecule: APOLIPOPROTEIN M

3D Structure

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Related Domains

Browse other domains in ApoM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyApoM(9.1.1.18)

Ligands

in contact, ≤ 4 Å

Propyl alcoholPOL
drugDrugBank DB03175
Sodium ionNA
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL

Pfam Families

ApoM domain

ClanCL0116Calycin

External Links

ECOD PDB View: 2XKL RCSB PDB: 2XKL PDBe: 2XKL UniProt: Q9Z1R3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.