ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yj5B2 - ECOD Domain | ECOD

ECOD/Domains/e4yj5B2

e4yj5B2

UID: 001787820

PDB

Range: B:14-116,B:219-396
PDB: 4YJ5 chain B(all domains)
UniProt: P14618 (all domains)
Gene: PKM

Molecule: Pyruvate kinase PKM

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPK(2002.1.1.11)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
SerineSER
drugDrugBank DB00133
Magnesium ion

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4YJ5 RCSB PDB: 4YJ5 PDBe: 4YJ5 UniProt: P14618

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.