ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yj5D3 - ECOD Domain | ECOD

ECOD/Domains/e4yj5D3

e4yj5D3

UID: 001787827

PDB

Range: D:117-218
PDB: 4YJ5 chain D(all domains)
UniProt: P14618 (all domains)
Gene: PKM

Molecule: Pyruvate kinase PKM

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPK beta-barrel domain-like(1.1.15)

FFamilyPK(1.1.15.1)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4YJ5 RCSB PDB: 4YJ5 PDBe: 4YJ5 UniProt: P14618

Downloads

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