ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ymzB1 - ECOD Domain | ECOD

ECOD/Domains/e4ymzB1

e4ymzB1

UID: 001787867

PDB

Range: B:2-251
PDB: 4YMZ chain B(all domains)
UniProt: Q8F5I5 (all domains)
Gene: tpiA

Molecule: Triosephosphate isomerase

3D Structure

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Related Domains

Browse other domains in TIM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTIM(2002.1.1.3)

Ligands

in contact, ≤ 4 Å

Dihydroxyacetone phosphate13P
drugDrugBank DB04326

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

Triosephosphate isomerase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4YMZ RCSB PDB: 4YMZ PDBe: 4YMZ UniProt: Q8F5I5

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.