ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yyyB2 - ECOD Domain | ECOD

ECOD/Domains/e4yyyB2

e4yyyB2

UID: 001787901

PDB

Range: B:71-335
PDB: 4YYY chain B(all domains)
UniProt: Q7CP66 (all domains)
Gene: deoA

Molecule: Thymidine phosphorylase

3D Structure

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Related Domains

Browse other domains in Glycos_transf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleoside phosphorylase/phosphoribosyltransferase catalytic domain(7544)

HH-groupNucleoside phosphorylase/phosphoribosyltransferase catalytic domain(7544.1)

TT-groupNucleoside phosphorylase/phosphoribosyltransferase catalytic domain(7544.1.1)

FFamilyGlycos_transf_3(7544.1.1.1)

Ligands

in contact, ≤ 4 Å

UridineURI
drugDrugBank DB02745

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer.

Pfam Families

PF00591Glycos_transf_3

Glycosyl transferase family, a/b domain

External Links

ECOD PDB View: 4YYY RCSB PDB: 4YYY PDBe: 4YYY UniProt: Q7CP66

Downloads

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Drug annotations from DrugDomain.