ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ag0A1 - ECOD Domain | ECOD

ECOD/Domains/e5ag0A1

e5ag0A1

UID: 001787948

PDB

Range: A:3-157
PDB: 5AG0 chain A(all domains)
UniProt: I2DBY1 (all domains)
Gene: dyp1

Molecule: DYE-DECOLORIZING PEROXIDASE

3D Structure

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Related Domains

Browse other domains in DyP_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyDyP_N(304.4.1.24)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Formic acid, Glycerol)

Formic acidFMT
DrugBank DB01942
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

DyP dimeric alpha+beta barrel domain

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 5AG0 RCSB PDB: 5AG0 PDBe: 5AG0 UniProt: I2DBY1

Downloads

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