ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cobC1 - ECOD Domain | ECOD

ECOD/Domains/e5cobC1

e5cobC1

UID: 001788066

PDB

Range: C:24-388
PDB: 5COB chain C(all domains)
UniProt: K7WDL7 (all domains)

Molecule: Iridoid synthase

3D Structure

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Related Domains

Browse other domains in PRISE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyPRISE(2003.1.1.84)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
(2E,6E)-2,6-dimethylocta-2,6-dienedialXOG

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycol

Pfam Families

PRISE-like Rossmann-fold domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5COB RCSB PDB: 5COB PDBe: 5COB UniProt: K7WDL7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.