ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5cobD1 - ECOD Domain | ECOD

ECOD/Domains/e5cobD1

e5cobD1

UID: 001788067

PDB

Range: D:24-388
PDB: 5COB chain D(all domains)
UniProt: K7WDL7 (all domains)

Molecule: Iridoid synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in PRISE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyPRISE(2003.1.1.84)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
(2E,6E)-2,6-dimethylocta-2,6-dienedialXOG

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycol

Pfam Families

PRISE-like Rossmann-fold domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5COB RCSB PDB: 5COB PDBe: 5COB UniProt: K7WDL7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.