ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fmrC1 - ECOD Domain | ECOD

ECOD/Domains/e5fmrC1

e5fmrC1

UID: 001788359

RepresentativePDB

Range: C:12-272
PDB: 5FMR chain C(all domains)
UniProt: Q944U2 (all domains)

Molecule: INTRAFLAGELLAR TRANSPORT PROTEIN COMPONENT IFT52

3D Structure

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Related Domains

Browse other domains in IFT52_GIFT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyIFT52_GIFT(2007.1.1.42)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF23355IFT52_GIFT

IFT52 GIFT domain

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 5FMR RCSB PDB: 5FMR PDBe: 5FMR UniProt: Q944U2

Downloads

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