ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ypmA2 - ECOD Domain | ECOD

ECOD/Domains/e4ypmA2

e4ypmA2

UID: 001788855

PDB

Range: A:695-780
PDB: 4YPM chain A(all domains)
UniProt: A0A059VAZ3 (all domains)
Gene: lonA1

Molecule: Lon protease

3D Structure

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Related Domains

Browse other domains in Lon_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupC-terminal subdomain in Lon-related proteases catalytic domains(3010)

HH-groupC-terminal subdomain in Lon-related proteases catalytic domains(3010.1)

TT-groupC-terminal subdomain in Lon-related proteases catalytic domains(3010.1.1)

FFamilyLon_C(3010.1.1.2)

Ligands

in contact, ≤ 4 Å

BortezomibBO2
drugDrugBank DB00188
Magnesium ionMG
metal

+ 1 additive (Citric acid)

Pfam Families

Lon protease (S16) C-terminal proteolytic domain

ClanCL0329S5

External Links

ECOD PDB View: 4YPM RCSB PDB: 4YPM PDBe: 4YPM UniProt: A0A059VAZ3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Citric acidCIT

DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.