ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fdqA1 - ECOD Domain | ECOD

ECOD/Domains/e5fdqA1

e5fdqA1

UID: 001789097

PDB

Range: A:57-582
PDB: 5FDQ chain A(all domains)
UniProt: Q05769 (all domains)
Gene: Ptgs2

Molecule: Prostaglandin G/H synthase 2

3D Structure

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Related Domains

Browse other domains in An_peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyAn_peroxidase(136.1.1.3)

Ligands

in contact, ≤ 4 Å

Acrylic AcidAKR
drugDrugBank DB02579
Protoporphyrin Ix Containing CoCOH
drugDrugBank DB02110

Pfam Families

PF03098An_peroxidase

Animal haem peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 5FDQ RCSB PDB: 5FDQ PDBe: 5FDQ UniProt: Q05769

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

N-Acetylglucosamine

drugDrugBank DB00141

2-[(2~{R})-2-(hydroxymethyloxy)propoxy]ethanol60A

+ 1 additive (octyl beta-D-glucopyranoside)

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.