ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ek5B1 - ECOD Domain | ECOD

ECOD/Domains/e5ek5B1

e5ek5B1

UID: 001790183

RepresentativePDB

Range: B:8-127
PDB: 5EK5 chain B(all domains)
UniProt: A0A0H2VAX3 (all domains)
Gene: c1275

Molecule: IRMA

3D Structure

Loading viewer...

Related Domains

Browse other domains in IrmA →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIrmA(11.1.1.278)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

interleukin receptor mimic protein A

ClanCL0159E-set

External Links

ECOD PDB View: 5EK5 RCSB PDB: 5EK5 PDBe: 5EK5 UniProt: A0A0H2VAX3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure