ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hdtA1 - ECOD Domain | ECOD

ECOD/Domains/e5hdtA1

e5hdtA1

UID: 001790185

RepresentativePDB

Range: A:20-1116
PDB: 5HDT chain A(all domains)
UniProt: Q9NTI5 (all domains)
Gene: PDS5B

Molecule: Sister chromatid cohesion protein PDS5 homolog B

3D Structure

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Related Domains

Browse other domains in PDS5 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPDS5(109.4.1.257)

Ligands

in contact, ≤ 4 Å

Phytic acidIHP
drugDrugBank DB14981

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sister chromatid cohesion protein PDS5 protein

ClanCL0020TPR

External Links

ECOD PDB View: 5HDT RCSB PDB: 5HDT PDBe: 5HDT UniProt: Q9NTI5

Downloads

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