ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ytrB1 - ECOD Domain | ECOD

ECOD/Domains/e4ytrB1

e4ytrB1

UID: 001790239

PDB

Range: B:1-290
PDB: 4YTR chain B(all domains)
UniProt: O50580 (all domains)

Molecule: D-tagatose 3-epimerase

3D Structure

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Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
1-deoxy-beta-L-tagatopyranoseTGK

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4YTR RCSB PDB: 4YTR PDBe: 4YTR UniProt: O50580

Downloads

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