ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4z8sB2 - ECOD Domain | ECOD

ECOD/Domains/e4z8sB2

e4z8sB2

UID: 001790281

PDB

Range: B:1-133
PDB: 4Z8S chain B(all domains)
UniProt: B7X8M2 (all domains)
Gene: MCL1

Molecule: rRNA N-glycosidase

3D Structure

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Related Domains

Browse other domains in Ricin_B_lectin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicin_B_lectin(6.1.1.4)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00652Ricin_B_lectin

Ricin-type beta-trefoil lectin domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 4Z8S RCSB PDB: 4Z8S PDBe: 4Z8S UniProt: B7X8M2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.