ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5e66A2 - ECOD Domain | ECOD

ECOD/Domains/e5e66A2

e5e66A2

UID: 001790869

PDB

Range: A:3-150,A:311-429
PDB: 5E66 chain A(all domains)
UniProt: K9LG83 (all domains)
Gene: HEF

Molecule: Hemagglutinin-esterase

3D Structure

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Related Domains

Browse other domains in Hema_esterase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupSGNH hydrolase(2007.5)

TT-groupSGNH hydrolase(2007.5.1)

FFamilyHema_esterase(2007.5.1.4)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
(6R)-5-acetamido-6-[(1S,2S)-3-acetamido-1,2-dihydroxypropyl]-3,5-dideoxy-beta-L-threo-hex-2-ulopyranosonic acid5KQ

+ 1 additive (Cacodylate ion)

Pfam Families

PF03996Hema_esterase

Hemagglutinin esterase

ClanCL0264SGNH_hydrolase

External Links

ECOD PDB View: 5E66 RCSB PDB: 5E66 PDBe: 5E66 UniProt: K9LG83

Downloads

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Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.