ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4y4nH1 - ECOD Domain | ECOD

ECOD/Domains/e4y4nH1

e4y4nH1

UID: 001791914

PDB

Range: H:4-262
PDB: 4Y4N chain H(all domains)
UniProt: F6BCS4 (all domains)
Gene: thi4

Molecule: Putative ribose 1,5-bisphosphate isomerase

3D Structure

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Related Domains

Browse other domains in Thi4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyThi4(2003.1.2.19)

Ligands

in contact, ≤ 4 Å

2-[(E)-[(4R)-5-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-4-oxidanyl-3-oxidanylidene-pentan-2-ylidene]amino]ethanoic acid48H
FE (II) IONFE2
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Thi4 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4Y4N RCSB PDB: 4Y4N PDBe: 4Y4N UniProt: F6BCS4

Downloads

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