ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5eulA2 - ECOD Domain | ECOD

ECOD/Domains/e5eulA2

e5eulA2

UID: 001792502

PDB

Range: A:14-226,A:349-395
PDB: 5EUL chain A(all domains)
UniProt: P28366 (all domains)
Gene: secA

Molecule: Protein translocase subunit SecA, Insertion Peptide Chimera

3D Structure

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Related Domains

Browse other domains in SecA_DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySecA_DEAD(2004.1.1.149)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Hexatantalum DodecabromideTBR
drugDrugBank DB04119

Pfam Families

PF07517SecA_DEAD

SecA DEAD-like domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5EUL RCSB PDB: 5EUL PDBe: 5EUL UniProt: P28366

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Beryllium trifluoride ion

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.