ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pmmA1 - ECOD Domain | ECOD

ECOD/Domains/e3pmmA1

e3pmmA1

UID: 000179348

PDB

Range: A:-1-379
PDB: 3PMM chain A(all domains)
UniProt: A6TB44 (all domains)
Gene: KPN_02389

Molecule: Putative cytoplasmic protein

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_88 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_88(109.2.1.23)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Formic acid, Imidazole)

Formic acidFMT
DrugBank DB01942
ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07470Glyco_hydro_88

Glycosyl Hydrolase Family 88

ClanCL00596_Hairpin

External Links

ECOD PDB View: 3PMM RCSB PDB: 3PMM PDBe: 3PMM UniProt: A6TB44

Downloads

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