ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2miqA1 - ECOD Domain | ECOD

ECOD/Domains/e2miqA1

e2miqA1

UID: 001806457

RepresentativePDB

Range: A:39-87
PDB: 2MIQ chain A(all domains)
UniProt: Q9VMJ7 (all domains)
Gene: Kdm5

Molecule: Lysine-specific demethylase lid

3D Structure

Loading viewer...

Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 2MIQ RCSB PDB: 2MIQ PDBe: 2MIQ UniProt: Q9VMJ7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure