ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dqpA1 - ECOD Domain | ECOD

ECOD/Domains/e5dqpA1

e5dqpA1

UID: 001806545

RepresentativePDB

Range: A:4-430
PDB: 5DQP chain A(all domains)
UniProt: Q9F9T3 (all domains)
Gene: emoA

Molecule: EDTA monooxygenase

3D Structure

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Related Domains

Browse other domains in Bac_luciferase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyBac_luciferase(2002.1.1.16)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL)

Sulfate ionSO4
DrugBank DB14546
2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOLPE4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00296Bac_luciferase

Luciferase-like monooxygenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5DQP RCSB PDB: 5DQP PDBe: 5DQP UniProt: Q9F9T3

Downloads

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