ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zy1A2 - ECOD Domain | ECOD

ECOD/Domains/e4zy1A2

e4zy1A2

UID: 001806706

PDB

Range: A:85-109,A:286-603
PDB: 4ZY1 chain A(all domains)
UniProt: A0A024V0B1 (all domains)
Gene: PFFVO_05086

Molecule: Probable M17 family aminopeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M17 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M17(2011.1.1.3)

Ligands

in contact, ≤ 4 Å

N-{(1R)-2-(hydroxyamino)-1-[4-(1-methyl-1H-pyrazol-4-yl)phenyl]-2-oxoethyl}-2,2-dimethylpropanamide4U5
Zinc ionZN
metal

+ 3 additives (Carbonate ion, Sulfate ion, Pentaethylene glycol)

Carbonate ion

Pfam Families

PF00883Peptidase_M17

Cytosol aminopeptidase family, catalytic domain

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 4ZY1 RCSB PDB: 4ZY1 PDBe: 4ZY1 UniProt: A0A024V0B1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14531

Sulfate ionSO4

DrugBank DB14546

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.