ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dp4D1 - ECOD Domain | ECOD

ECOD/Domains/e5dp4D1

e5dp4D1

UID: 001806912

PDB

Range: D:1-180
PDB: 5DP4 chain D(all domains)
UniProt: A9XG43 (all domains)

Molecule: 3C proteinase

3D Structure

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Related Domains

Browse other domains in Peptidase_C3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyPeptidase_C3(1.1.17.2)

Ligands

in contact, ≤ 4 Å

ethyl (2Z,4S)-4-{[(2S)-2-methyl-3-phenylpropanoyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate5E8

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00548Peptidase_C3

3C cysteine protease (picornain 3C)

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5DP4 RCSB PDB: 5DP4 PDBe: 5DP4 UniProt: A9XG43

Downloads

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