ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5f13B1 - ECOD Domain | ECOD

ECOD/Domains/e5f13B1

e5f13B1

UID: 001807044

PDB

Range: B:3-130
PDB: 5F13 chain B(all domains)
UniProt: Q04371 (all domains)
Gene: YMR027W

Molecule: Protein-glutamate O-methyltransferase

3D Structure

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Related Domains

Browse other domains in ARMT1-like_dom →

Classification

AArchitecturealpha bundles(a.7)

XX-groupalpha-helical domain in AF1104-like proteins(4009)

HH-groupalpha-helical domain in AF1104-like proteins(4009.1)

TT-groupalpha-helical domain in AF1104-like proteins(4009.1.1)

FFamilyARMT1-like_dom(4009.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01937ARMT1-like_dom

Damage-control phosphatase ARMT1-like domain

External Links

ECOD PDB View: 5F13 RCSB PDB: 5F13 PDBe: 5F13 UniProt: Q04371

Downloads

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