ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cktD1 - ECOD Domain | ECOD

ECOD/Domains/e5cktD1

e5cktD1

UID: 001810913

PDB

Range: D:3-101
PDB: 5CKT chain D(all domains)
UniProt: P03052 (all domains)
Gene: trfB

Molecule: TrfB transcriptional repressor protein

3D Structure

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Related Domains

Browse other domains in KORA →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyKORA(101.1.1.71)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

TrfB plasmid transcriptional repressor

ClanCL0123HTH

External Links

ECOD PDB View: 5CKT RCSB PDB: 5CKT PDBe: 5CKT UniProt: P03052

Downloads

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