ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ijxA1 - ECOD Domain | ECOD

ECOD/Domains/e5ijxA1

e5ijxA1

UID: 001811542

PDB

Range: A:50-427
PDB: 5IJX chain A(all domains)
UniProt: C5P455 (all domains)
Gene: CPC735_063460

Molecule: Tyrosine--tRNA ligase, mitochondrial

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1b →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1b(2005.1.1.2)

Ligands

in contact, ≤ 4 Å

TyrosineTYR
drugDrugBank DB00135

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00579tRNA-synt_1b

tRNA synthetases class I (W and Y)

ClanCL0039HUP

External Links

ECOD PDB View: 5IJX RCSB PDB: 5IJX PDBe: 5IJX UniProt: C5P455

Downloads

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