ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r3jA1 - ECOD Domain | ECOD

ECOD/Domains/e4r3jA1

e4r3jA1

UID: 001812464

PDB

Range: A:526-586,A:606-614
PDB: 4R3J chain A(all domains)
UniProt: C8W8H7 (all domains)
Gene: Apar_1344

Molecule: Peptidoglycan glycosyltransferase

3D Structure

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Related Domains

Browse other domains in PBP_dimer_2 →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupPenicillin binding protein dimerisation domain(3702)

HH-groupPenicillin binding protein dimerisation domain(3702.1)

TT-groupPenicillin binding protein dimerisation domain(3702.1.1)

FFamilyPBP_dimer_2(3702.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21922PBP_dimer_2

Penicillin binding protein A dimerisation domain

ClanCL0776PBP_NTD

External Links

ECOD PDB View: 4R3J RCSB PDB: 4R3J PDBe: 4R3J UniProt: C8W8H7

Downloads

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