ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1w8kA3 - ECOD Domain | ECOD

ECOD/Domains/e1w8kA3

e1w8kA3

UID: 001812769

PDB

Range: A:381-474
PDB: 1W8K chain A(all domains)
UniProt: O61130 (all domains)
Gene: AMA1

Molecule: APICAL MEMBRANE ANTIGEN 1

3D Structure

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Related Domains

Browse other domains in AMA-1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupApical membrane antigen 1(903)

HH-groupApical membrane antigen 1(903.1)

TT-groupApical membrane antigen 1(903.1.1)

FFamilyAMA-1(903.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Apical membrane antigen 1

ClanCL0168PAN

External Links

ECOD PDB View: 1W8K RCSB PDB: 1W8K PDBe: 1W8K UniProt: O61130

Downloads

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