ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xf1A3 - ECOD Domain | ECOD

ECOD/Domains/e1xf1A3

e1xf1A3

UID: 001812795

PDB

Range: A:713-929
PDB: 1XF1 chain A(all domains)
UniProt: P15926 (all domains)
Gene: scpA

Molecule: C5a peptidase

3D Structure

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Related Domains

Browse other domains in CHU_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCHU_C(11.1.1.175)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Acetate, Citric acid)

AcetateACT
DrugBank DB14511within 5 Å only
Citric acid

Pfam Families

CHU_C Type IX secretion signal domain

ClanCL0159E-set

External Links

ECOD PDB View: 1XF1 RCSB PDB: 1XF1 PDBe: 1XF1 UniProt: P15926

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.