ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5e6fB1 - ECOD Domain | ECOD

ECOD/Domains/e5e6fB1

e5e6fB1

UID: 001813019

PDB

Range: B:3-144
PDB: 5E6F chain B(all domains)
UniProt: Q6VZ86 (all domains)
Gene: CNPV261

Molecule: CNPV261 Holliday junction resolvase protein

3D Structure

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Related Domains

Browse other domains in Pox_A22 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPox_A22(2484.1.1.44)

Ligands

in contact, ≤ 4 Å

D-tartaric acidTAR
drugDrugBank DB01694
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04848Pox_A22

Poxvirus A22 protein

ClanCL0219RNase_H

External Links

ECOD PDB View: 5E6F RCSB PDB: 5E6F PDBe: 5E6F UniProt: Q6VZ86

Downloads

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