ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dacB3 - ECOD Domain | ECOD

ECOD/Domains/e5dacB3

e5dacB3

UID: 001819851

PDB

Range: B:2-180,B:1142-1311
PDB: 5DAC chain B(all domains)
UniProt: G0SHW7 (all domains)
Gene: RAD50

Molecule: Putative uncharacterized protein,Putative uncharacterized protein

3D Structure

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Related Domains

Browse other domains in AAA_23,SbcC_Walker_B →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_23,SbcC_Walker_B(2004.1.1.199)

Ligands

in contact, ≤ 4 Å

4-(2-Aminoethyl)Benzenesulfonyl FluorideAES
drugDrugBank DB07347
Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

PF13558SbcC_Walker_B

SbcC/RAD50-like, Walker B motif

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5DAC RCSB PDB: 5DAC PDBe: 5DAC UniProt: G0SHW7

Downloads

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Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.