ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2cw7A4 - ECOD Domain | ECOD

ECOD/Domains/e2cw7A4

e2cw7A4

UID: 001820957

RepresentativePDB

Range: A:360-496
PDB: 2CW7 chain A(all domains)
UniProt: P77933 (all domains)
Gene: pol

Molecule: Endonuclease PI-PkoII

3D Structure

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Related Domains

Browse other domains in LAGLIDADG_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyLAGLIDADG_3(242.1.1.7)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14528LAGLIDADG_3

LAGLIDADG-like domain

ClanCL0324Homing_endonuc

External Links

ECOD PDB View: 2CW7 RCSB PDB: 2CW7 PDBe: 2CW7 UniProt: P77933

Downloads

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