ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yyvA1 - ECOD Domain | ECOD

ECOD/Domains/e4yyvA1

e4yyvA1

UID: 001821115

PDB

Range: A:1-221
PDB: 4YYV chain A(all domains)
UniProt: A0A182DW09 (all domains)

Molecule: Ficin isoform C

3D Structure

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Related Domains

Browse other domains in Peptidase_C1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C1(219.1.1.1)

Ligands

in contact, ≤ 4 Å

3,6,9,12,15,18-HEXAOXAICOSANE16P
drugDrugBank DB06867

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00112Peptidase_C1

Papain family cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4YYV RCSB PDB: 4YYV PDBe: 4YYV UniProt: A0A182DW09

Downloads

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Drug annotations from DrugDomain.