ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5dnfE1 - ECOD Domain | ECOD

ECOD/Domains/e5dnfE1

e5dnfE1

UID: 001821345

PDB

Range: E:4-68
PDB: 5DNF chain E(all domains)
UniProt: P13501 (all domains)
Gene: CCL5

Molecule: C-C motif chemokine 5

3D Structure

Loading viewer...

Related Domains

Browse other domains in IL8 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupIL8-related(1170)

HH-groupIL8-related(1170.1)

TT-groupIL8(1170.1.1)

FFamilyIL8(1170.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

Small cytokines (intecrine/chemokine), interleukin-8 like

ClanCL0730IL8

External Links

ECOD PDB View: 5DNF RCSB PDB: 5DNF PDBe: 5DNF UniProt: P13501

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.