ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fmaB1 - ECOD Domain | ECOD

ECOD/Domains/e5fmaB1

e5fmaB1

UID: 001821443

PDB

Range: B:255-294
PDB: 5FMA chain B(all domains)
UniProt: P46531 (all domains)
Gene: NOTCH1

Molecule: NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1

3D Structure

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Related Domains

Browse other domains in EGF →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilyEGF(389.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

EGF-like domain

ClanCL0001EGF

External Links

ECOD PDB View: 5FMA RCSB PDB: 5FMA PDBe: 5FMA UniProt: P46531

Downloads

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