ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fviD1 - ECOD Domain | ECOD

ECOD/Domains/e5fviD1

e5fviD1

UID: 001821458

PDB

Range: D:0-223
PDB: 5FVI chain D(all domains)
UniProt: Q5S6Z9 (all domains)

Molecule: Green to red photoconvertible GFP-like protein EosFP

3D Structure

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Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 5FVI RCSB PDB: 5FVI PDBe: 5FVI UniProt: Q5S6Z9

Downloads

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