ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d65B1 - ECOD Domain | ECOD

ECOD/Domains/e5d65B1

e5d65B1

UID: 001822050

PDB

Range: B:3-69
PDB: 5D65 chain B(all domains)
UniProt: P10147 (all domains)
Gene: CCL3

Molecule: C-C motif chemokine 3

3D Structure

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Related Domains

Browse other domains in IL8 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupIL8-related(1170)

HH-groupIL8-related(1170.1)

TT-groupIL8(1170.1.1)

FFamilyIL8(1170.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
Chloride ionCL
alpha-D-glucopyranoseGLC

Pfam Families

Small cytokines (intecrine/chemokine), interleukin-8 like

ClanCL0730IL8

External Links

ECOD PDB View: 5D65 RCSB PDB: 5D65 PDBe: 5D65 UniProt: P10147

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.