ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hb5A1 - ECOD Domain | ECOD

ECOD/Domains/e5hb5A1

e5hb5A1

UID: 001822308

PDB

Range: A:-2-136
PDB: 5HB5 chain A(all domains)
UniProt: G0SAK3 (all domains)
Gene: NUP145

Molecule: Nucleoporin NUP145

3D Structure

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Related Domains

Browse other domains in Nucleoporin2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupZU5/Nup98-C/GAIN-B autoproteolytic domain-related(12.5)

TT-groupZU5/Nup98-C/GAIN-B autoproteolytic domain-related(12.5.1)

FFamilyNucleoporin2(12.5.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citrate anion)

Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04096Nucleoporin2

Nup98-96 autopeptidase S59

ClanCL0661Gain

External Links

ECOD PDB View: 5HB5 RCSB PDB: 5HB5 PDBe: 5HB5 UniProt: G0SAK3

Downloads

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