ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bv3B6 - ECOD Domain | ECOD

ECOD/Domains/e5bv3B6

e5bv3B6

UID: 001823967

PDB

Range: B:6-130
PDB: 5BV3 chain B(all domains)
UniProt: Q06151 (all domains)
Gene: DCS1

Molecule: m7GpppX diphosphatase

3D Structure

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Related Domains

Browse other domains in DcpS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupmRNA decapping enzyme DcpS N-terminal domain(519)

HH-groupmRNA decapping enzyme DcpS N-terminal domain(519.1)

TT-groupmRNA decapping enzyme DcpS N-terminal domain(519.1.1)

FFamilyDcpS(519.1.1.1)

Ligands

in contact, ≤ 4 Å

7-methyl-7,8-dihydroguanosine-5'-diphosphateM7G
drugDrugBank DB01960

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

Scavenger mRNA decapping enzyme (DcpS) N-terminal

External Links

ECOD PDB View: 5BV3 RCSB PDB: 5BV3 PDBe: 5BV3 UniProt: Q06151

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.