ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3x0pA1 - ECOD Domain | ECOD

ECOD/Domains/e3x0pA1

e3x0pA1

UID: 001824276

PDB

Range: A:10-168
PDB: 3X0P chain A(all domains)
UniProt: Q5SKW5 (all domains)
Gene: TTHA0528

Molecule: ADP-ribose pyrophosphatase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine-5-DiphosphoriboseAR6
drugDrugBank DB02059
MANGANESE (II) IONMN
metal

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 3X0P RCSB PDB: 3X0P PDBe: 3X0P UniProt: Q5SKW5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.