ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d29A1 - ECOD Domain | ECOD

ECOD/Domains/e5d29A1

e5d29A1

UID: 001824419

PDB

Range: A:118-350
PDB: 5D29 chain A(all domains)
UniProt: Q04609 (all domains)
Gene: FOLH1

Molecule: Glutamate carboxypeptidase 2

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyPA(2487.1.1.7)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
4-[(2~{S})-2-carboxy-5-(oxidanylamino)-5-oxidanylidene-pentyl]benzoic acid5Q1
Calcium ionCA

Pfam Families

PA domain

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 5D29 RCSB PDB: 5D29 PDBe: 5D29 UniProt: Q04609

Downloads

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metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.