ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5e9hB1 - ECOD Domain | ECOD

ECOD/Domains/e5e9hB1

e5e9hB1

UID: 001824443

PDB

Range: B:12-546
PDB: 5E9H chain B(all domains)
UniProt: Q4HYR2 (all domains)
Gene: ICL1

Molecule: Isocitrate lyase

3D Structure

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Related Domains

Browse other domains in ICL →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyICL(2002.1.1.22)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Isocitrate lyase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5E9H RCSB PDB: 5E9H PDBe: 5E9H UniProt: Q4HYR2

Downloads

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