ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ed4B2 - ECOD Domain | ECOD

ECOD/Domains/e5ed4B2

e5ed4B2

UID: 001824447

PDB

Range: B:139-247
PDB: 5ED4 chain B(all domains)
UniProt: P71814 (all domains)
Gene: phoP

Molecule: Response regulator

3D Structure

Loading viewer...

Related Domains

Browse other domains in Trans_reg_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyTrans_reg_C(101.1.2.8)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00486Trans_reg_C

Transcriptional regulatory protein, C terminal

ClanCL0123HTH

External Links

ECOD PDB View: 5ED4 RCSB PDB: 5ED4 PDBe: 5ED4 UniProt: P71814

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure