ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ed4E1 - ECOD Domain | ECOD

ECOD/Domains/e5ed4E1

e5ed4E1

UID: 001824448

PDB

Range: E:139-247
PDB: 5ED4 chain E(all domains)
UniProt: P71814 (all domains)
Gene: phoP

Molecule: Response regulator

3D Structure

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Related Domains

Browse other domains in Trans_reg_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyTrans_reg_C(101.1.2.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Cacodylate ion, 1,2-ETHANEDIOL)

Cacodylate ionCAC
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00486Trans_reg_C

Transcriptional regulatory protein, C terminal

ClanCL0123HTH

External Links

ECOD PDB View: 5ED4 RCSB PDB: 5ED4 PDBe: 5ED4 UniProt: P71814

Downloads

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