ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iavB1 - ECOD Domain | ECOD

ECOD/Domains/e5iavB1

e5iavB1

UID: 001824615

PDB

Range: B:12-216
PDB: 5IAV chain B(all domains)
UniProt: Q81LZ8 (all domains)

Molecule: Procollagen-Proline Dioxygenase

3D Structure

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Related Domains

Browse other domains in 2OG-FeII_Oxy_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-FeII_Oxy_3(10.12.1.53)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF136402OG-FeII_Oxy_3

2OG-Fe(II) oxygenase superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 5IAV RCSB PDB: 5IAV PDBe: 5IAV UniProt: Q81LZ8

Downloads

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