ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ww5A2 - ECOD Domain | ECOD

ECOD/Domains/e2ww5A2

e2ww5A2

UID: 001826877

RepresentativePDB

Range: A:267-468
PDB: 2WW5 chain A(all domains)
UniProt: Q8DP07 (all domains)
Gene: lytC

Molecule: 1,4-BETA-N-ACETYLMURAMIDASE

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_25 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_25(2002.1.1.55)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01183Glyco_hydro_25

Glycosyl hydrolases family 25

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2WW5 RCSB PDB: 2WW5 PDBe: 2WW5 UniProt: Q8DP07

Downloads

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