ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c0eA2 - ECOD Domain | ECOD

ECOD/Domains/e5c0eA2

e5c0eA2

UID: 001827174

PDB

Range: A:182-276
PDB: 5C0E chain A(all domains)
UniProt: P04439 (all domains)
Gene: HLA-A

Molecule: HLA class I histocompatibility antigen, A-2 alpha chain

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, 1,2-ETHANEDIOL, Tetraethylene glycol)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO
Tetraethylene glycolPG4

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 5C0E RCSB PDB: 5C0E PDBe: 5C0E UniProt: P04439

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.